Information for motif21


Reverse Opposite:

p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.617
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif19.74%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif2.54%
Average Position of motif in Targets72.6 +/- 55.4bp
Average Position of motif in Background112.5 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGGACATVCATG-----
---ACATTCATGACACG

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGACATVCATG----
GACCACATTCATACAAT

MA0130.1_ZNF354C/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGACATVCATG
GTGGAT-------

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGGACATVCATG-
GTATTGACAGCTNNTT

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------TGGACATVCATG
CAGATGTGCACATACGT-

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TGGACATVCATG
NNATTGGACTTTNGNN

MA0106.2_TP53/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TGGACATVCATG
ACATGCCCAGACATG

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGGACATVCATG-
CTTTGTTATGCAAAT

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TGGACATVCATG-
GTATTGACAGGTNNTT

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TGGACATVCATG-
NTATTGACAGGTNNTN