Information for motif22


Reverse Opposite:

p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.622
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif14.47%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets137.5 +/- 46.1bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGTGCACC-----
TACATGTGCACATAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGTGCACC-----
CAGATGTGCACATACGT

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TGTGCACC--
GGGCCGTGTGCAAAAA

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCACC-
NNNNTTGTGTGCTTNN

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCACC-
NNGCGTGTGTGCNGCN

MA0058.2_MAX/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCACC
CCATGTGCTT-

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCACC---
NNNNTTGGGCACNNCN

MA0102.3_CEBPA/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCACC
NATTGTGCAAT

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTGCACC
ATTGCGCAAC

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCACC--
ANATTTTTGCAANTN