Information for motif26


Reverse Opposite:

p-value:1e-8
log p-value:-1.907e+01
Information Content per bp:1.701
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif13.16%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets63.4 +/- 46.0bp
Average Position of motif in Background151.3 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0037.2_GATA3/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGATGAGATG
AGATAAGA--

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGATGAGATG-----
TATTATGGGATGGATAA

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGATGAGATG
NNGAGATAAGA--

MA0029.1_Mecom/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGATGAGATG---
AAGATAAGATAACA

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AGATGAGATG-----
TTTTTAGAGATAAGAAATAAAG

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATGAGATG
ANAGATAAGAA-

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGATGAGATG------
AAGGCCAGATGGTCCGG

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGATGAGATG
AGGTGTGAAM

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGATGAGATG
NBWGATAAGR--

MA0036.2_GATA2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGATGAGATG--
NCAGATAAGAANNN