Information for motif27


Reverse Opposite:

p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.764
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif2.53%
Average Position of motif in Targets117.6 +/- 50.2bp
Average Position of motif in Background148.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCTAGTTG----
ACTTGCTACCTACACC

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCTAGTTG----
ACATGCTACCTAATAC

MA0104.3_Mycn/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTAGTTG
GCCACGTG

MA0461.1_Atoh1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTAGTTG
GCCATCTG

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTAGTTG
NGCTN----

MA0009.1_T/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTAGTTG----
-CTAGGTGTGAA

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTAGTTG--
KCCACGTGAC

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTAGTTG-
GGGTACGTGC

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGTTG----
CACGGCAGTTGGTNN

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCTAGTTG----
NNNTGGCAGTTGGTNN