Information for motif28


Reverse Opposite:

p-value:1e-7
log p-value:-1.637e+01
Information Content per bp:1.630
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif11.84%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets96.6 +/- 38.7bp
Average Position of motif in Background86.3 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0507.1_POU2F2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACATTTTCATTT
TTCATTTGCATAT

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACATTTTCATTT
--ATTTGCATAT

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ACATTTTCATTT--
--ACTTTCGTTTCT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACATTTTCATTT
--ATTTGCATAA

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACATTTTCATTT---
TCAGTTTCATTTTCC

MA0042.1_FOXI1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACATTTTCATTT
GGATGTTTGTTT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACATTTTCATTT--
--ACTTTCACTTTC

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACATTTTCATTT--
TNTAATTTGCATANNN

MA0508.1_PRDM1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACATTTTCATTT---
TCACTTTCACTTTCN

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACATTTTCATTT---
NTNTTGTTGTTTGTN