Information for motif29


Reverse Opposite:

p-value:1e-7
log p-value:-1.637e+01
Information Content per bp:1.472
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif11.84%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets79.9 +/- 49.2bp
Average Position of motif in Background110.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAACGGGT-
NHAACBGYYV

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAACGGGT-----
NNANTAACGGTTNNNAN

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAACGGGT---
GGAGAAAGGTGCGA

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAACGGGT-----
GAAGAACAGGTGTCCG

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAACGGGT-----
NNNNTAACGGTTNNNAN

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAACGGGT-------
GGCGAGGGGTCAAGGGC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAACGGGT--
GGAGGGGGAA

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAACGGGT--
ANGNAAAGGTCA

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAACGGGT
ACAGGATGTGGT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GAACGGGT--
----AGGTCA