Information for motif3


Reverse Opposite:

p-value:1e-20
log p-value:-4.672e+01
Information Content per bp:1.719
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif30.26%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets105.8 +/- 49.9bp
Average Position of motif in Background79.1 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GATCCTAR---
CTGATCGAAACCAAAGT

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GATCCTAR---
GATAACATCCTAGTAG

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GATCCTAR
CAAAATCGAAACTAA

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GATCCTAR---
TAGTGATCATCATTA

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GATCCTAR
ATAAACCGAAACCAA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GATCCTAR
ACTGAAACCA-

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GATCCTAR-
CGTATCGAAACCAAA

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GATCCTAR------
AGATGCTRCTRCCHT

PB0125.1_Gata3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GATCCTAR-------
TTTTGTAGATTTTATCGACTTA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GATCCTAR
NTATYGATCH---