Information for motif4


Reverse Opposite:

p-value:1e-19
log p-value:-4.408e+01
Information Content per bp:1.799
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif23.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.82%
Average Position of motif in Targets89.6 +/- 57.0bp
Average Position of motif in Background150.4 +/- 47.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GAAGTCCA----
GGCAAAAGTCCAATAA

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTCCA
NGAAGC---

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GAAGTCCA
ACVAGGAAGT---

MA0114.2_HNF4A/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GAAGTCCA-
NAGNNCAAAGTCCAN

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------GAAGTCCA
TTAAGAGGAAGTTA-

ETS(ETS)/Promoter/Homer

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GAAGTCCA
AACCGGAAGT---

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GAAGTCCA
AVCAGGAAGT---

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GAAGTCCA
NACCGGAAGT---

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GAAGTCCA
ANCCGGAAGT---

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------GAAGTCCA
CANAGNNCAAAGTCCA