Information for motif5


Reverse Opposite:

p-value:1e-19
log p-value:-4.408e+01
Information Content per bp:1.803
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif23.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.6 +/- 48.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCCCACAG
HTTTCCCASG-

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TCCCACAG-
---CACAGN

MA0002.2_RUNX1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCCCACAG--
AAACCACAGAN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCCCACAG--
NWAACCACADNN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCACAG-
AAACCACAGC

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCCCACAG----
NNAGTCCCACTCNNNN

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCCACAG-
YCCGCCCACGCN

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCCACAG
NYTTCCCGCC-

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCCACAG-----
CAAACCACAAACCCC

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCCCACAG----
ATTTCCCAGVAKSCY