Information for motif8


Reverse Opposite:

p-value:1e-15
log p-value:-3.528e+01
Information Content per bp:1.748
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif28.95%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif3.84%
Average Position of motif in Targets119.0 +/- 52.8bp
Average Position of motif in Background68.2 +/- 42.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0598.1_EHF/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CCTTGCTGTC
CCTTCCTG--

MA0098.2_Ets1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCTTGCTGTC--
CCCACTTCCTGTCTC

MA0474.1_Erg/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCTGTC
CCACTTCCTGT-

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCTTGCTGTC
ACTTCCTGTT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGCTGTC
CACTTCCTGT-

MA0475.1_FLI1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCTGTC
CCACTTCCTGT-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCTTGCTGTC---
---TGCTGACTCA

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGCTGTC
CACTTCCTGT-

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCTTGCTGTC
----GCTGTG

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCTGTC
CCCCCTGCTGTG