Information for motif19


Reverse Opposite:

p-value:1e-21
log p-value:-4.957e+01
Information Content per bp:1.702
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.0 +/- 53.7bp
Average Position of motif in Background136.5 +/- 44.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.78
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTGAGGYCCWGA
---AGGCCTNG-

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTGAGGYCCWGA
---AGGCCTAG-

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGAGGYCCWGA----
--CAGGCCNNGGCCNN

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTGAGGYCCWGA
NTNTGGGGGGTCNNNA

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTGAGGYCCWGA
CGTGGGTGGTCC---

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGAGGYCCWGA-
NNANTGGTGGTCTTNNN

MA0018.2_CREB1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGAGGYCCWGA
-TGACGTCA---

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGGYCCWGA--
NTNNNGGGGTCANGNNN

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTGAGGYCCWGA
---AGGTCA---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GTGAGGYCCWGA
NTGGGTGTGGCC----