Information for motif23


Reverse Opposite:

p-value:1e-14
log p-value:-3.414e+01
Information Content per bp:1.729
Number of Target Sequences with motif525.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif558.1
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets99.6 +/- 55.9bp
Average Position of motif in Background97.0 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0115.1_Ehf_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGATAGGA-------
AAGATCGGAANTNNNA

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATAGGA-------
CTACTAGGATGTNNTN

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGATAGGA----
---AAGGAAGTA

MA0498.1_Meis1/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGATAGGA
NNNTGAGTGACAGCT

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGATAGGA----
TAAACTGATAAGAAGAT

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGATAGGA-
--AGAGGAA

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGATAGGA
GGTGYTGACAGS-

POL002.1_INR/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGATAGGA
NNNANTGA-----

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGATAGGA----
--DCCGGAARYN

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGATAGGA----
NNATTGACAGGTGCTT