Information for motif20


Reverse Opposite:

p-value:1e-20
log p-value:-4.801e+01
Information Content per bp:1.776
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 58.1bp
Average Position of motif in Background152.2 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGTATACCATAG
NYYTGTTTACHN---

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTATACCATAG
TGTTTACA----

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTATACCATAG
ATTTGCATACAATGG

MA0030.1_FOXF2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTATACCATAG
NTTGTTTACGTTNN

MA0031.1_FOXD1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTATACCATAG
ATGTTTAC-----

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TGTATACCATAG
NNNNTTTGTTTACNNT--

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TGTATACCATAG
NNNNNNCTTTTATAN-----

PB0019.1_Foxl1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGTATACCATAG
NNNTTTGTTTACATTTN

MA0108.2_TBP/Jaspar

Match Rank:9
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TGTATACCATAG
NNNNNNCTTTTATAN-----

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTATACCATAG
NNNTTTGTTTACNTTNN