Information for motif25


Reverse Opposite:

p-value:1e-12
log p-value:-2.993e+01
Information Content per bp:1.961
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif15.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets108.7 +/- 52.9bp
Average Position of motif in Background126.6 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATCAGCTTGG
NCGTCAGC----

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATCAGCTTGG
--AAGCTTG-

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATCAGCTTGG
NAHCAGCTGD-

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATCAGCTTGG
ANCAGCTG--

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATCAGCTTGG
TGAGTCAGCA---

PB0105.1_Arid3a_2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATCAGCTTGG
ACCCGTATCAAATTT-

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATCAGCTTGG---
NNNNATGACCTTGANTN

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGCTTGG
NGTGACCTTGG

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATCAGCTTGG
--CAGCC---

MA0141.2_Esrrb/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCAGCTTGG---
-TGACCTTGANNN