Information for motif6


Reverse Opposite:

p-value:1e-130
log p-value:-3.012e+02
Information Content per bp:1.506
Number of Target Sequences with motif1558.0
Percentage of Target Sequences with motif7.90%
Number of Background Sequences with motif1220.0
Percentage of Background Sequences with motif4.05%
Average Position of motif in Targets99.0 +/- 55.6bp
Average Position of motif in Background100.6 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAGATGGCGC-----
GCCASCAGGGGGCGCYVNNG

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TAGATGGCGC--
TGGCCACCAGGGGGCGCTA

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAGATGGCGC-----
ATAAGGGCGCGCGAT

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TAGATGGCGC
AACAGATGGC--

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TAGATGGCGC---
GCGGAGGTGTCGCCTC

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGATGGCGC
CAGATGGC--

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TAGATGGCGC---
TGGCCACCAGGTGGCACTNT

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGATGGCGC-----
ATAAAGGCGCGCGAT

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGATGGCGC------
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGATGGCGC------
NNNNTTGGCGCCGANNN