Information for motif24


Reverse Opposite:

p-value:1e-13
log p-value:-3.062e+01
Information Content per bp:1.933
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets112.1 +/- 48.8bp
Average Position of motif in Background75.4 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGAGTTAGT
AGGTGTTAAT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGAGTTAGT
AGGTGTCA--

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGAGTTAGT
ACVAGGAAGT

PH0039.1_Mnx1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGAGTTAGT----
GTACTAATTAGTGGCG

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGAGTTAGT
ACAGGATGTGGT

MA0136.1_ELF5/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGTTAGT
AAGGAAGTA--

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTTAGT--
NTNNNAGGAGTCTCNTN

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGGAGTTAGT--
NNNTGGCAGTTGGTNN

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGAGTTAGT-----
AGATGCTRCTRCCHT

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTTAGT-
CTACTAGGATGTNNTN