Information for motif29


Reverse Opposite:

p-value:1e-8
log p-value:-1.870e+01
Information Content per bp:1.838
Number of Target Sequences with motif316.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif345.1
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets100.3 +/- 57.2bp
Average Position of motif in Background101.1 +/- 55.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTTTTT----
NNNNTTTTTTTTTNAAC

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTTTTT---
NTNTTGTTGTTTGTN

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CTTTTTTTTT-----
-TTTTTTTTCNNGTN

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTTTTT----
GNATTTTTTTTTTGANC

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTTTTTTTTT-----
NNTTTNTTTTNGNNN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTTTTT-
RSTTTCRSTTTC

MA0514.1_Sox3/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTTTTTTTTT
CCTTTGTTTT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTTTTT-
ACTTTCACTTTC

MA0481.1_FOXP1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTTTTTTTTT-------
--CTTTGTTTACTTTTN

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTTTTTTT--
NNNTCCTTTGTTCTNNN