p-value: | 1e-28 |
log p-value: | -6.471e+01 |
Information Content per bp: | 1.919 |
Number of Target Sequences with motif | 29.0 |
Percentage of Target Sequences with motif | 0.15% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 94.2 +/- 57.4bp |
Average Position of motif in Background | 140.0 +/- 21.2bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 2.11 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCAHTGTGACAC-- ----KTTCACACCT |
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Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GCAHTGTGACAC-- ------TGACACCT |
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MA0258.2_ESR2/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCAHTGTGACAC AGGNCANNGTGACCT |
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Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAHTGTGACAC GWAAYHTGABMC |
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Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCAHTGTGACAC GTAGGTCACTGGGTCA- |
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PH0164.1_Six4/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAHTGTGACAC------ -ATAAATGACACCTATCA |
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MA0119.1_TLX1::NFIC/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCAHTGTGACAC TTGGCATGGTGCCA- |
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ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCAHTGTGACAC- GGTCANNGTGACCTN |
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MA0078.1_Sox17/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCAHTGTGACAC CTCATTGTC---- |
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MA0498.1_Meis1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCAHTGTGACAC-- NNNTGAGTGACAGCT |
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