Information for motif3


Reverse Opposite:

p-value:1e-76
log p-value:-1.769e+02
Information Content per bp:1.728
Number of Target Sequences with motif1657.0
Percentage of Target Sequences with motif11.75%
Number of Background Sequences with motif2619.9
Percentage of Background Sequences with motif7.34%
Average Position of motif in Targets100.6 +/- 54.5bp
Average Position of motif in Background98.5 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0031.1_FOXD1/Jaspar

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GTAAACAA
GTAAACAT

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---GTAAACAA-
TATGTAAACANG

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:3
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--GTAAACAA--
NDGTAAACARRN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GTAAACAA
GTAAACAG

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GTAAACAA-
AAGTAAACAAA

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACAA----
AAAAAGTAAACAAAGAC

MA0148.3_FOXA1/Jaspar

Match Rank:7
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----GTAAACAA---
CAAAGTAAACANNNN

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---GTAAACAA
AAAGTAAACA-

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACAA----
AAAAAGTAAACAAACAC

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---GTAAACAA
AAAGTAAACA-