Information for motif2


Reverse Opposite:

p-value:1e-141
log p-value:-3.256e+02
Information Content per bp:1.715
Number of Target Sequences with motif1055.0
Percentage of Target Sequences with motif7.48%
Number of Background Sequences with motif1114.7
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets98.7 +/- 56.0bp
Average Position of motif in Background97.9 +/- 54.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGGGGC-------
GCCASCAGGGGGCGCYVNNG

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGGGGGC----
TGGCCACCAGGGGGCGCTA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGGGGGC-----
TGGCCACCAGGTGGCACTNT

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCACCAGGGGGC
CACAGCAGGGGG-

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGGGGC-
CCCCCCCGGGGGNN

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGGGGC-
NCCCCCCCGGGGGGN

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGGGGC-
ACCCCCCCGGGGGGN

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCACCAGGGGGC------
-NNNAAGGGGGCGGGNNN

MA0154.2_EBF1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCACCAGGGGGC
GTCCCCAGGGA--

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCACCAGGGGGC
TCCCCTGGGGAC