Information for motif37


Reverse Opposite:

p-value:1e-16
log p-value:-3.871e+01
Information Content per bp:1.783
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets106.5 +/- 54.0bp
Average Position of motif in Background103.9 +/- 63.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ACTTAGTATC
--TAAGTAT-

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACTTAGTATC
GGTAAGTA--

PH0107.1_Msx2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTTAGTATC---
GAAGACCAATTAGCGCT

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAGTATC----
NNNTTAGGTAGCNTNT

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACTTAGTATC
-TTAAGTGGA

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACTTAGTATC---
CCGCATAGCAACGGA

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAGTATC----
NNTGTAGGTAGCANNT

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAGTATC------
NNNTTGGTTTCGNTNNN

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACTTAGTATC--
GCGAACTAATTAATGC

MA0125.1_Nobox/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACTTAGTATC
ACCAATTA--