Information for motif10


Reverse Opposite:

p-value:1e-54
log p-value:-1.251e+02
Information Content per bp:1.510
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.7 +/- 48.9bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGCCGAATATCA-----
--ACCCGTATCAAATTT

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCCGAATATCA-----
--TNGAATTTCATTNAN

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCGAATATCA---
AGCCGAAAAAAAAAT

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGCCGAATATCA-----
--AAAAATAACAAACGG

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCCGAATATCA
GGCCATAAATCA

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCGAATATCA
CAGCC--------

MA0485.1_Hoxc9/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCCGAATATCA-
GGCCATAAATCAC

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCCGAATATCA-----
AATAGGGTATCAATATT

MA0141.2_Esrrb/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCCGAATATCA
AGCTCAAGGTCA

MA0160.1_NR4A2/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCCGAATATCA-
-----AAGGTCAC