Homer Known Motif Enrichment Results (Motifs)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 14109, Total Background Sequences = 35608
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-211-4.876e+020.0000649.04.60%363.21.02%motif file (matrix) pdf
2BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-200-4.613e+020.0000759.05.38%513.51.44%motif file (matrix) pdf
3Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-105-2.421e+020.0000381.02.70%247.50.69%motif file (matrix) pdf
4FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-83-1.926e+020.00001587.011.26%2420.16.78%motif file (matrix) pdf
5Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-69-1.601e+020.00001162.08.24%1698.34.76%motif file (matrix) pdf
6FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-68-1.571e+020.00001864.013.22%3129.78.77%motif file (matrix) pdf
7Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-67-1.563e+020.00001263.08.96%1908.65.35%motif file (matrix) pdf
8Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-58-1.355e+020.00001405.09.97%2273.26.37%motif file (matrix) pdf
9Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-55-1.277e+020.00001716.012.17%2956.18.28%motif file (matrix) pdf
10Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-54-1.250e+020.00001435.010.18%2380.66.67%motif file (matrix) pdf
11GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-53-1.239e+020.00002420.017.16%4506.312.62%motif file (matrix) pdf
12HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-50-1.173e+020.0000972.06.89%1475.34.13%motif file (matrix) pdf
13Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-45-1.053e+020.00002347.016.65%4462.712.50%motif file (matrix) pdf
14TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-37-8.644e+010.00001334.09.46%2358.06.60%motif file (matrix) pdf
15Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-35-8.078e+010.00002586.018.34%5185.214.52%motif file (matrix) pdf
16Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-30-6.996e+010.00001210.08.58%2184.76.12%motif file (matrix) pdf
17TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-30-6.969e+010.0000287.02.04%339.20.95%motif file (matrix) pdf
18Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-28-6.660e+010.0000720.05.11%1172.93.29%motif file (matrix) pdf
19TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-28-6.611e+010.0000977.06.93%1708.94.79%motif file (matrix) pdf
20Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-27-6.368e+010.00001700.012.06%3306.29.26%motif file (matrix) pdf
21FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-24-5.744e+010.0000686.04.87%1144.43.21%motif file (matrix) pdf
22Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-23-5.389e+010.0000440.03.12%665.31.86%motif file (matrix) pdf
23Sp1(Zf)/Promoter/Homer1e-22-5.288e+010.0000507.03.60%801.82.25%motif file (matrix) pdf
24REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-19-4.417e+010.000043.00.30%18.00.05%motif file (matrix) pdf
25c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-15-3.592e+010.0000532.03.77%932.82.61%motif file (matrix) pdf
26Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-15-3.474e+010.00002718.019.28%5970.816.72%motif file (matrix) pdf
27JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-14-3.320e+010.0000199.01.41%275.60.77%motif file (matrix) pdf
28Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-13-3.157e+010.00002015.014.29%4340.412.16%motif file (matrix) pdf
29PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-12-2.916e+010.00001486.010.54%3128.68.76%motif file (matrix) pdf
30Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-12-2.810e+010.00001300.09.22%2708.47.59%motif file (matrix) pdf
31RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-11-2.649e+010.00001797.012.75%3890.410.90%motif file (matrix) pdf
32CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-10-2.479e+010.000043.00.30%32.70.09%motif file (matrix) pdf
33Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-10-2.400e+010.00003166.022.46%7219.620.22%motif file (matrix) pdf
34TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-9-2.292e+010.0000153.01.09%221.30.62%motif file (matrix) pdf
35Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-9-2.127e+010.0000289.02.05%501.71.41%motif file (matrix) pdf
36OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-8-1.889e+010.0000196.01.39%321.90.90%motif file (matrix) pdf
37CRE(bZIP)/Promoter/Homer1e-7-1.735e+010.0000333.02.36%618.81.73%motif file (matrix) pdf
38Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-7-1.721e+010.0000281.01.99%507.41.42%motif file (matrix) pdf
39Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-7-1.708e+010.0000188.01.33%313.80.88%motif file (matrix) pdf
40Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-7-1.645e+010.0000303.02.15%559.81.57%motif file (matrix) pdf
41Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-6-1.556e+010.0000326.02.31%615.01.72%motif file (matrix) pdf
42Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-6-1.424e+010.0000910.06.45%1963.25.50%motif file (matrix) pdf
43Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-5-1.324e+010.0000291.02.06%555.01.55%motif file (matrix) pdf
44GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-5-1.307e+010.0000221.01.57%404.21.13%motif file (matrix) pdf
45Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-5-1.289e+010.0000592.04.20%1239.43.47%motif file (matrix) pdf
46Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-5-1.202e+010.0000784.05.56%1697.34.75%motif file (matrix) pdf
47Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer1e-4-1.136e+010.0001533.03.78%1120.43.14%motif file (matrix) pdf
48Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-4-1.128e+010.00013197.022.68%7572.121.21%motif file (matrix) pdf
49NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-4-1.097e+010.0001662.04.70%1425.53.99%motif file (matrix) pdf
50Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-4-1.049e+010.0001472.03.35%989.02.77%motif file (matrix) pdf
51Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-4-1.041e+010.00011112.07.89%2501.37.01%motif file (matrix) pdf
52Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-4-1.029e+010.0002455.03.23%952.62.67%motif file (matrix) pdf
53Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-4-9.621e+000.00032964.021.02%7043.619.73%motif file (matrix) pdf
54Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-4-9.225e+000.000475.00.53%119.60.34%motif file (matrix) pdf
55ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-3-9.108e+000.00052319.016.45%5467.815.32%motif file (matrix) pdf
56EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-3-8.833e+000.0006335.02.38%692.01.94%motif file (matrix) pdf
57Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-3-8.690e+000.0007637.04.52%1398.93.92%motif file (matrix) pdf
58AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-3-8.590e+000.0008926.06.57%2088.35.85%motif file (matrix) pdf
59NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-3-8.364e+000.001085.00.60%143.70.40%motif file (matrix) pdf
60CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-3-8.066e+000.00132956.020.97%7071.519.81%motif file (matrix) pdf
61GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.887e+000.0015111.00.79%200.20.56%motif file (matrix) pdf
62Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-3-7.880e+000.001580.00.57%135.20.38%motif file (matrix) pdf
63GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-3-7.767e+000.00171281.09.09%2962.58.30%motif file (matrix) pdf
64Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-3-7.703e+000.0017418.02.96%898.02.52%motif file (matrix) pdf
65Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-3-7.678e+000.0018796.05.65%1793.35.02%motif file (matrix) pdf
66STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-3-7.661e+000.0018323.02.29%677.61.90%motif file (matrix) pdf
67RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-3-7.655e+000.0018122.00.87%225.50.63%motif file (matrix) pdf
68ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-3-7.424e+000.00221487.010.55%3472.69.73%motif file (matrix) pdf
69ETS(ETS)/Promoter/Homer1e-3-7.400e+000.0022456.03.23%990.82.78%motif file (matrix) pdf
70GFY(?)/Promoter/Homer1e-3-7.362e+000.002295.00.67%169.90.48%motif file (matrix) pdf
71Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-3-7.309e+000.00231713.012.15%4028.411.28%motif file (matrix) pdf
72ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-3-7.046e+000.0030719.05.10%1620.24.54%motif file (matrix) pdf
73Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-3-7.001e+000.00311539.010.92%3610.010.11%motif file (matrix) pdf
74MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-2-6.181e+000.0069297.02.11%634.51.78%motif file (matrix) pdf
75Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-2-6.176e+000.0069272.01.93%576.31.61%motif file (matrix) pdf
76BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-6.085e+000.0074782.05.55%1790.35.01%motif file (matrix) pdf
77LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer1e-2-5.967e+000.008272.00.51%129.00.36%motif file (matrix) pdf
78X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-2-5.656e+000.0110143.01.01%286.10.80%motif file (matrix) pdf
79Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-2-5.355e+000.01471513.010.73%3593.310.07%motif file (matrix) pdf
80Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-2-5.275e+000.0157130.00.92%260.40.73%motif file (matrix) pdf
81USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-2-5.172e+000.0172559.03.96%1271.23.56%motif file (matrix) pdf
82NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-2-5.141e+000.017667.00.48%122.60.34%motif file (matrix) pdf
83Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-2-5.082e+000.0184594.04.21%1357.33.80%motif file (matrix) pdf
84KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-2-4.985e+000.02001882.013.35%4516.612.65%motif file (matrix) pdf
85ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-2-4.970e+000.02011944.013.79%4670.613.08%motif file (matrix) pdf
86Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-2-4.918e+000.0209715.05.07%1654.04.63%motif file (matrix) pdf
87EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-2-4.848e+000.0222903.06.40%2112.05.92%motif file (matrix) pdf