Information for motif19


Reverse Opposite:

p-value:1e-42
log p-value:-9.691e+01
Information Content per bp:1.956
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets110.0 +/- 37.0bp
Average Position of motif in Background99.7 +/- 52.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TATAGGAGTT-----
NTNNNAGGAGTCTCNTN

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATAGGAGTT----
CTACTAGGATGTNNTN

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TATAGGAGTT---
TGCGCATAGGGGAGGAG

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TATAGGAGTT-----
NNATTGGACTTTNGNN

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TATAGGAGTT-----
CAAAGGCGTGGCCAG

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TATAGGAGTT-
TATAGAGATAAGAATTG

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TATAGGAGTT-----
GCGGAGGTGTCGCCTC

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TATAGGAGTT----
AAGATCGGAANTNNNA

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TATAGGAGTT--
ANATTTTACGAGNNNN

MA0009.1_T/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TATAGGAGTT--
-CTAGGTGTGAA