Information for motif41


Reverse Opposite:

p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.0 +/- 56.7bp
Average Position of motif in Background147.5 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)2.54
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TATGCTCCTC
---GCTCCG-

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATGCTCCTC
CNGTCCTCCC-

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TATGCTCCTC
--NGCTN---

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TATGCTCCTC-
-----TCCCCA

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TATGCTCCTC---
TTGTATGCAAATTAGA

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TATGCTCCTC----
TACGAGACTCCTCTAAC

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TATGCTCCTC-----
ACATGCTACCTAATAC

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TATGCTCCTC---
TTGTATGCAAATTAGA

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TATGCTCCTC----
NNAGTCCCACTCNNNN

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TATGCTCCTC
TTATGCAAAT-