Information for motif35


Reverse Opposite:

p-value:1e-21
log p-value:-4.927e+01
Information Content per bp:1.981
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets91.9 +/- 33.0bp
Average Position of motif in Background93.5 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTTGGTGTA--
-CTAGGTGTGAA

MA0059.1_MYC::MAX/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACTTGGTGTA
GACCACGTGGT---

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGGTGTA---
ANTCCTTTGTCTNNNN

MA0104.3_Mycn/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGGTGTA
CACGTGGC---

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTTGGTGTA
ACTTCCTGTT

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGGTGTA
CACTTCCTGT-

PH0033.1_Gbx1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------ACTTGGTGTA
TGCCACTAATTAGTGTA

MA0113.2_NR3C1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGGTGTA--
AGNACATTNTGTTCT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGGTGTA
CACTTCCTGT-

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGGTGTA
CACGTGNT---