Information for motif17


Reverse Opposite:

p-value:1e-43
log p-value:-1.012e+02
Information Content per bp:1.977
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.3 +/- 54.2bp
Average Position of motif in Background101.7 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGGACCTGGGCC-
NNAGGGACAAGGGCNC

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGACCTGGGCC
ACAGGATGTGGT--

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGGACCTGGGCC-
-----CTAGGCCT

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGACCTGGGCC--
GGGGCCGAGGCCTG

MA0141.2_Esrrb/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGACCTGGGCC-
-TGACCTTGANNN

MA0138.2_REST/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGACCTGGGCC------
TTCAGCACCATGGACAGCGCC

MA0592.1_ESRRA/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGACCTGGGCC
NGTGACCTTGG--

MA0524.1_TFAP2C/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGACCTGGGCC----
-TGCCCTGGGGCNANN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGGACCTGGGCC-
NNTNCGCACCTGTNGAN

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGGACCTGGGCC-
NNNNATGACCTTGANTN