Information for motif13


Reverse Opposite:

p-value:1e-49
log p-value:-1.135e+02
Information Content per bp:1.720
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif34.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets90.5 +/- 53.3bp
Average Position of motif in Background89.6 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCAGTGATCCC---
CGAACAGTGCTCACTAT

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGTGATCCC----
GNNNATTAATCCCTNCN

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGTGATCCC----
GANNATTAATCCCTNNN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATCAGTGATCCC
--CNGTCCTCCC

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCAGTGATCCC-----
ANANNTGATACCCNATN

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCAGTGATCCC-----
ANANGTGATACCCTATN

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCAGTGATCCC-----
ANANNTGATACCCTATN

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ATCAGTGATCCC-
-----TAATCCCN

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATCAGTGATCCC----
AATCGTTAATCCCTTTA

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCAGTGATCCC-----
TGTCGTGACCCCTTAAT