Information for motif43


Reverse Opposite:

p-value:1e-1
log p-value:-3.151e+00
Information Content per bp:1.929
Number of Target Sequences with motif380.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif880.6
Percentage of Background Sequences with motif2.47%
Average Position of motif in Targets101.6 +/- 57.9bp
Average Position of motif in Background99.3 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.93
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGCAC-----
NTNTATGTGCACATNNN

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGCAC-----
NNGTATGTGCACATNNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----GTGTGCAC---
GGGCCGTGTGCAAAAA

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GTGTGCAC---
GAAAAGGTGTGAAAATT

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGCAC------
NSTGTTTRCWCAGBNNN

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCAC--
NNGCGTGTGTGCNGCN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTGTGCAC
AGGTGTGAAM

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGCAC------
NNNNTGAGCACTGTNNG

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCAC--
NNNNTTGTGTGCTTNN

MA0009.1_T/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTGTGCAC
CTAGGTGTGAA-