Information for motif29


Reverse Opposite:

p-value:1e-26
log p-value:-6.114e+01
Information Content per bp:1.530
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.1 +/- 61.7bp
Average Position of motif in Background115.5 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CATATCAGGC-
CCATATATGGNA

MA0083.2_SRF/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CATATCAGGC--
CATGCCCAAATAAGGCAA

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CATATCAGGC--
NTNTTCTTATCAGTNTN

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATATCAGGC-
TTCCATATATGGAA

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATATCAGGC
YCTTATCWVN-

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATATCAGGC
NCCTTATCTG--

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CATATCAGGC--
ACCCGTATCAAATTT

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CATATCAGGC-
GACAGAGATATCAGTGT

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATATCAGGC
NNCTTATCTN--

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATATCAGGC--
CCACACAGCAGGAGA