Information for motif6


Reverse Opposite:

p-value:1e-68
log p-value:-1.572e+02
Information Content per bp:1.723
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.7 +/- 50.5bp
Average Position of motif in Background150.7 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATATAGCGCCTC----
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATATAGCGCCTC---
NNNNTTGGCGCCGANNN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATATAGCGCCTC
---TGACACCT-

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATATAGCGCCTC
DTTTCCCGCC--

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATATAGCGCCTC
CAAGATGGCGGC--

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------ATATAGCGCCTC
ANNNGGATATATCCNNN-

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATATAGCGCCTC
--AGCGCGCC--

MA0033.1_FOXL1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATATAGCGCCTC
TATACATA-------

MA0095.2_YY1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ATATAGCGCCTC
CAAGATGGCGGC--

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----ATATAGCGCCTC
DCYAAAAATAGM-----