p-value: | 1e-17 |
log p-value: | -4.122e+01 |
Information Content per bp: | 1.944 |
Number of Target Sequences with motif | 223.0 |
Percentage of Target Sequences with motif | 1.58% |
Number of Background Sequences with motif | 296.9 |
Percentage of Background Sequences with motif | 0.83% |
Average Position of motif in Targets | 95.5 +/- 58.2bp |
Average Position of motif in Background | 103.9 +/- 57.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.13 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0171.1_Nkx2-1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCACTAG----- TAAGCCACTTGAAATT |
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MA0122.1_Nkx3-2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCACTAG- NCCACTTAN |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCACTAG---------- TGGCCACCAGGTGGCACTNT |
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MA0139.1_CTCF/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCCACTAG--------- TGGCCACCAGGGGGCGCTA |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCACTAG------ ATAACCACTTGAAAATT |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCACTAG----- TAAGCCACTTGAAATT |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCACTAG----- TAAGCCACTTGAATTT |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCACTAG BCMATTAG |
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MA0130.1_ZNF354C/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCACTAG ATCCAC--- |
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MA0161.1_NFIC/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCCACTAG TGCCAA--- |
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