Information for motif4


Reverse Opposite:

p-value:1e-73
log p-value:-1.695e+02
Information Content per bp:1.951
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets114.2 +/- 53.3bp
Average Position of motif in Background80.6 +/- 48.2bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAGCTATTATAT
CAGCTGTT----

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTATTATAT
ACAGCTGTTV---

MA0521.1_Tcf12/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTATTATAT
NNGCAGCTGTT----

MA0108.2_TBP/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTATTATAT
NNNNNNCTTTTATAN

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTATTATAT
NNNNNNCTTTTATAN

MA0500.1_Myog/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTATTATAT
NNGCAGCTGTC----

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTATTATAT
HCAGCTGDTN---

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTATTATAT
AGCAGCTGCTNN--

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTATTATAT
TGCAGCTGTCCCT-

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTATTATAT
HWWGTCAGCAWWTTT--