p-value: | 1e-62 |
log p-value: | -1.433e+02 |
Information Content per bp: | 1.860 |
Number of Target Sequences with motif | 39.0 |
Percentage of Target Sequences with motif | 0.28% |
Number of Background Sequences with motif | 1.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 99.1 +/- 58.3bp |
Average Position of motif in Background | 109.3 +/- 38.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.56 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PH0175.1_Vax2/Jaspar
Match Rank: | 1 |
Score: | 0.80 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GRCTAATTAAGG- GTGCACTAATTAAGAC |
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PH0135.1_Phox2a/Jaspar
Match Rank: | 2 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GRCTAATTAAGG--- NNACTAATTAATNNNN |
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PH0159.1_Rhox6/Jaspar
Match Rank: | 3 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GRCTAATTAAGG-- NNGCATTAATTAANGCA |
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PH0011.1_Alx1_2/Jaspar
Match Rank: | 4 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GRCTAATTAAGG-- NNNAATTAATTAANGNG |
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PH0160.1_Shox2/Jaspar
Match Rank: | 5 |
Score: | 0.76 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GRCTAATTAAGG-- NNNAATTAATTAANNNG |
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Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
Match Rank: | 6 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GRCTAATTAAGG -NCTAATTA--- |
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PH0002.1_Alx4/Jaspar
Match Rank: | 7 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GRCTAATTAAGG-- GNNNATTAATTAATGCG |
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PH0156.1_Rax/Jaspar
Match Rank: | 8 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GRCTAATTAAGG-- NNGCGCTAATTAGTGCA |
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PH0028.1_En1/Jaspar
Match Rank: | 9 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GRCTAATTAAGG- GCGAACTAATTAATGC |
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PH0062.1_Hoxb7/Jaspar
Match Rank: | 10 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GRCTAATTAAGG--- GTAGTAATTAATGCAA |
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