p-value: | 1e-42 |
log p-value: | -9.861e+01 |
Information Content per bp: | 1.910 |
Number of Target Sequences with motif | 29.0 |
Percentage of Target Sequences with motif | 0.21% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 95.0 +/- 51.0bp |
Average Position of motif in Background | 107.7 +/- 61.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.34 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
MA0077.1_SOX9/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TACCATGGTATA GAACAATGG---- |
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MA0143.3_Sox2/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TACCATGGTATA AACAAAGG---- |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TACCATGGTATA- NNTNNACAATGGGANNN |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TACCATGGTATA GGTTGCCATGGCAA- |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TACCATGGTATA NGTTGCCATGGCAA- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TACCATGGTATA RACAAWGG---- |
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MA0515.1_Sox6/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TACCATGGTATA AAAACAATGG---- |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TACCATGGTATA-- NNNCCATTGTGTNAN |
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PB0098.1_Zfp410_1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TACCATGGTATA----- TATTATGGGATGGATAA |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TACCATGGTATA AATGAACAATGGAATT |
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