Information for motif21


Reverse Opposite:

p-value:1e-39
log p-value:-9.005e+01
Information Content per bp:1.450
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.9 +/- 31.3bp
Average Position of motif in Background147.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTAATCTTGA---
NNTAATCCNGNCNN

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTAATCTTGA----
CTAATATTGCTAAA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTAATCTTGA
YSTTATCT---

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAATCTTGA
GCTAATCC---

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTAATCTTGA
-TAATCCCN-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTAATCTTGA
YCTTATCWVN-

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTAATCTTGA
NTGACCTTGA

MA0164.1_Nr2e3/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTAATCTTGA
--AAGCTTG-

MA0160.1_NR4A2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTAATCTTGA
GTGACCTT--

MA0032.1_FOXC1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTAATCTTGA
GGTAAGTA-------