Information for motif27


Reverse Opposite:

p-value:1e-27
log p-value:-6.428e+01
Information Content per bp:1.836
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets105.5 +/- 54.9bp
Average Position of motif in Background73.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0050.2_IRF1/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------TTCACYTTGYTT--
TTTTACTTTCACTTTCACTTT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCACYTTGYTT
ACTTTCACTTTC---

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTCACYTTGYTT-
NNNNATGACCTTGANTN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTCACYTTGYTT
ACTTTCACTTTC---

MA0508.1_PRDM1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTCACYTTGYTT
TCACTTTCACTTTCN--

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTCACYTTGYTT
NTGACCTTGA--

MA0442.1_SOX10/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTCACYTTGYTT
----CTTTGT--

MA0051.1_IRF2/Jaspar

Match Rank:8
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------TTCACYTTGYTT
GTTTTGCTTTCACTTTCC--

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTCACYTTGYTT
AGTTTCAGTTTC---

MA0141.2_Esrrb/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTCACYTTGYTT-
-TGACCTTGANNN