p-value: | 1e-16 |
log p-value: | -3.857e+01 |
Information Content per bp: | 1.957 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 0.10% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 96.5 +/- 61.5bp |
Average Position of motif in Background | 73.2 +/- 50.5bp |
Strand Bias (log2 ratio + to - strand density) | 4.2 |
Multiplicity (# of sites on avg that occur together) | 2.71 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGTATCTGTCTG- -----CTGTCTGG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGTATCTGTCTG- ---VBSYGTCTGG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGTATCTGTCTG------ -NNTNNTGTCTGGNNTNG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGTATCTGTCTG- -----TWGTCTGV |
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bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTATCTGTCTG----- NAGTTTCABTHTGACTNW |
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PH0170.1_Tgif2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTATCTGTCTG--- AACTAGCTGTCAATAC |
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MA0498.1_Meis1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGTATCTGTCTG------ ---AGCTGTCACTCACCT |
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PH0105.1_Meis3/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTATCTGTCTG--- AATTACCTGTCAATAC |
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PB0036.1_Irf6_1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AGTATCTGTCTG NNNTTGGTTTCGNTNNN |
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MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGTATCTGTCTG------ -----CTGTCTGTCACCT |
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