Information for motif8


Reverse Opposite:

p-value:1e-59
log p-value:-1.377e+02
Information Content per bp:1.966
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.4 +/- 65.8bp
Average Position of motif in Background106.6 +/- 50.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0039.2_Klf4/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGGGTGGGGCAT
TGGGTGGGGC--

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AGGGTGGGGCAT
GGGGNGGGGC--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGGGTGGGGCAT
DGGGYGKGGC--

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGGGTGGGGCAT
TGGGTGTGGCN-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGGGTGGGGCAT
NTGGGTGTGGCC-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGGGTGGGGCAT
TGGGTGTGGC--

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGGGTGGGGCAT
-GGGGGGGG---

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTGGGGCAT
GGGGGCGGGGC--

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGGTGGGGCAT
AGGGGGCGGGGCTG

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGGGTGGGGCAT-
NNAGGGGCGGGGTNNA