Information for motif14


Reverse Opposite:

p-value:1e-89
log p-value:-2.056e+02
Information Content per bp:1.809
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.1 +/- 48.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TCAATATTGACT
NNTNNCAATATTAG--

MA0047.2_Foxa2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCAATATTGACT----
----TGTTTACTTAGG

MA0148.3_FOXA1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCAATATTGACT---
TCCATGTTTACTTTG

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCAATATTGACT--
----TGTTTACTTT

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCAATATTGACT-----
-NNNTATTGAATTGNNN

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCAATATTGACT--
----TGTTTACTTT

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TCAATATTGACT
TCACCCATCAATAAACA--

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCAATATTGACT
DGATCRATAN-----

MA0046.1_HNF1A/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCAATATTGACT
GNTAATNATTAACC

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCAATATTGACT----
NNNTTTGTTTACTTTTN