Information for motif15


Reverse Opposite:

p-value:1e-78
log p-value:-1.812e+02
Information Content per bp:1.940
Number of Target Sequences with motif898.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif443.8
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets99.9 +/- 54.8bp
Average Position of motif in Background97.1 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GTCACGTG--
GTCACGTGGT

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GTCACGTG-
GGTCACGTGA

MA0093.2_USF1/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTG--
GGTCACGTGGC

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GTCACGTG
GHCACGTG

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GTCACGTG
GNCACGTG

E-box(HLH)/Promoter/Homer

Match Rank:6
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---GTCACGTG-
CCGGTCACGTGA

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GTCACGTG--
GTCACGTGGM

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTG-
NGKCACGTGM

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:9
Score:0.90
Offset:-6
Orientation:reverse strand
Alignment:------GTCACGTG--------
NTNNTNGTCACGTGACNNNTNC

MA0526.1_USF2/Jaspar

Match Rank:10
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGTG--
GGTCACATGAC