Information for motif20


Reverse Opposite:

p-value:1e-61
log p-value:-1.411e+02
Information Content per bp:1.728
Number of Target Sequences with motif1581.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif1007.4
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets99.5 +/- 55.1bp
Average Position of motif in Background99.3 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGAAC-
CCTTTGATGT

MA0523.1_TCF7L2/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGAAC---
TNCCTTTGATCTTN

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGAAC----
NNTTCCTTTGATCTANA

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGAAC-
CCTTTGAWGT

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGAAC-
TNCCTTTGATGT

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGAAC----
NNTTCCTTTGATCTNNA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGAAC----
ATTTCCTTTGATCTATA

CHR/Cell-Cycle-Exp/Homer

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTTTGAAC---
-TTTGAAACCG

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGAAC----
AATCCCTTTGATCTATC

MA0484.1_HNF4G/Jaspar

Match Rank:10
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGAAC---
TGGACTTTGNNCTCN