Information for motif21


Reverse Opposite:

p-value:1e-18
log p-value:-4.282e+01
Information Content per bp:1.628
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif33.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets112.2 +/- 57.6bp
Average Position of motif in Background77.3 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0021.1_Dlx2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACAATTACWC---
GGAATAATTACCTCAG

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACAATTACWC
-YCATTAMC-

MA0125.1_Nobox/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACAATTACWC
ACCAATTA---

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----ACAATTACWC--
TCGCGATAATTACCGAC

MA0075.1_Prrx2/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACAATTACWC
--AATTA---

PH0072.1_Hoxc8/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACAATTACWC---
ACNNTAATTACNNCAN

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACAATTACWC
--AATTATT-

PH0023.1_Dlx4/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACAATTACWC--
GCGCTATAATTACCGAC

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATTACWC
NNNTAACAATTATAN

PH0024.1_Dlx5/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATTACWC-
NANNGNTAATTACCNN