Information for motif4


Reverse Opposite:

p-value:1e-660
log p-value:-1.521e+03
Information Content per bp:1.783
Number of Target Sequences with motif2110.0
Percentage of Target Sequences with motif4.90%
Number of Background Sequences with motif478.8
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets97.7 +/- 50.3bp
Average Position of motif in Background92.3 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGGGGC-------
GCCASCAGGGGGCGCYVNNG

MA0139.1_CTCF/Jaspar

Match Rank:2
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGGGGGC----
TGGCCACCAGGGGGCGCTA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGGGGGC-----
TGGCCACCAGGTGGCACTNT

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCACCAGGGGGC
CACAGCAGGGGG-

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CCACCAGGGGGC
----CAGATGGC

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGGGGC
--AACAGATGGC

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCACCAGGGGGC------
-NNNAAGGGGGCGGGNNN

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCACCAGGGGGC
CACCCCCGGGGGGG

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGGGGC-
NCCCCCCCGGGGGGN

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGGGGC-
ACCCCCCCGGGGGGN