Information for motif6


Reverse Opposite:

p-value:1e-306
log p-value:-7.055e+02
Information Content per bp:1.912
Number of Target Sequences with motif8055.0
Percentage of Target Sequences with motif18.70%
Number of Background Sequences with motif5281.5
Percentage of Background Sequences with motif12.38%
Average Position of motif in Targets99.0 +/- 55.8bp
Average Position of motif in Background98.7 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGAAGGCG--
CAAGATGGCGGC

MA0461.1_Atoh1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGCG
CAGATGGC-

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGAAGGCG-------
CAAAGGCGTGGCCAG

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGGCG-----
NNNAAGGGGGCGGGNNN

MA0095.2_YY1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGAAGGCG--
CAAGATGGCGGC

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGAAGGCG----
----GGCGCGCT

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGCG------
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAAGGCG------
ATAAGGGCGCGCGAT

MA0516.1_SP2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGAAGGCG----
GGGNGGGGGCGGGGC

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AGAAGGCG------
GCCASCAGGGGGCGCYVNNG