Information for motif12


Reverse Opposite:

p-value:1e-137
log p-value:-3.159e+02
Information Content per bp:1.883
Number of Target Sequences with motif2724.0
Percentage of Target Sequences with motif5.29%
Number of Background Sequences with motif1624.0
Percentage of Background Sequences with motif3.18%
Average Position of motif in Targets100.0 +/- 56.2bp
Average Position of motif in Background102.1 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AGATGGCG--
CAAGATGGCGGC

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AGATGGCG--
CAAGATGGCGGC

MA0461.1_Atoh1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGATGGCG
CAGATGGC-

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGCG
AACAGATGGC-

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AGATGGCG---
AAGGCCAGATGGTCCGG

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGATGGCG-----
NNNAAGGGGGCGGGNNN

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AGATGGCG------
GCCASCAGGGGGCGCYVNNG

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGCG
AACAKATGGY-

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGATGGCG------
ATAAGGGCGCGCGAT

MA0139.1_CTCF/Jaspar

Match Rank:10
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------AGATGGCG---
TGGCCACCAGGGGGCGCTA