Information for motif17


Reverse Opposite:

p-value:1e-75
log p-value:-1.729e+02
Information Content per bp:1.849
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets161.1 +/- 37.3bp
Average Position of motif in Background115.4 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GYCGCGTATA--
TCCGTCGCTTAAAAG

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GYCGCGTATA------
ANNNGGATATATCCNNN

MA0033.1_FOXL1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GYCGCGTATA----
------TATGTNTA

MA0108.2_TBP/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GYCGCGTATA----------
-----GTATAAAAGGCGGGG

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GYCGCGTATA----------
-----GTATAAAAGGCGGGG

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GYCGCGTATA-----
TNNTTTCGTATTNNANN

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GYCGCGTATA----
NTCNTCCCCTATNNGNN

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GYCGCGTATA----
AAACCTCGTAAAATTT

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GYCGCGTATA----
GCCGCGCAGTGCGT

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GYCGCGTATA---
NNNTNGGGCGTATNNTN