Information for motif20


Reverse Opposite:

p-value:1e-61
log p-value:-1.418e+02
Information Content per bp:1.750
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.5 +/- 43.8bp
Average Position of motif in Background103.6 +/- 94.0bp
Strand Bias (log2 ratio + to - strand density)-2.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCGAAAGTAT-
CGTATCGAAACCAAA

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCGAAAGTAT---
CTGATCGAAACCAAAGT

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAAGTAT
ATAAACCGAAACCAA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAAGTAT
CAAAATCGAAACTAA

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCGAAAGTAT--
AAGATCGGAANTNNNA

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCGAAAGTAT
AGAAACGAAAGT--

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCGAAAGTAT
ACTGAAACCA-

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAGTAT
AACCGGAAGT--

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCGAAAGTAT-
TTGACCGAGAATTCC

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGAAAGTAT
ANCCGGAAGT--