Information for motif21


Reverse Opposite:

p-value:1e-55
log p-value:-1.284e+02
Information Content per bp:1.762
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.3 +/- 39.3bp
Average Position of motif in Background116.1 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCCCCATCTWCT
TCCCCA------

MA0057.1_MZF1_5-13/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCATCTWCT
TTCCCCCTAC---

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCCCCATCTWCT-
CTATCCCCGCCCTATT

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCCCATCTWCT
ACCACATCCTGT

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCCCCATCTWCT
NNAGTCCCACTCNNNN

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCCCCATCTWCT--
ANNTNCCCACCCANNAC

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCCCATCTWCT
--GCCATCTGTT

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCCCCATCTWCT---
CGACCCAATCAACGGTG

MA0467.1_Crx/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCCCCATCTWCT-
--CTAATCCTCTT

GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TCCCCATCTWCT
CTTATCTCHMCATCT---