Information for motif23


Reverse Opposite:

p-value:1e-54
log p-value:-1.251e+02
Information Content per bp:1.982
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets166.0 +/- 41.4bp
Average Position of motif in Background110.1 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGAGTCGCA--
NTNNNAGGAGTCTCNTN

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGAGGAGTCGCA--
GCGGAGGTGTCGCCTC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGTCGCA
GGGAGGACNG---

MA0491.1_JUND/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGAGGAGTCGCA
-NATGAGTCACN

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGAGGAGTCGCA
AGGGGGCGGGGCTG--

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGAGGAGTCGCA
GGGGGAATCCCC

PB0142.1_Jundm2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGAGGAGTCGCA--
ATTGATGAGTCACCAA

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGAGGAGTCGCA---
GGCGAGGGGTCAAGGGC

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAGTCGCA---
AGGGGGATTAGCTGCC

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGAGGAGTCGCA----
TGCGGAGTGGGACTGG