Information for motif24


Reverse Opposite:

p-value:1e-51
log p-value:-1.184e+02
Information Content per bp:1.883
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets164.6 +/- 57.3bp
Average Position of motif in Background111.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CKGTTAGTAG
-GGTAAGTA-

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CKGTTAGTAG
BRRCVGTTDN---

MA0124.1_NKX3-1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CKGTTAGTAG
---TAAGTAT

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CKGTTAGTAG-----
NNTGTAGGTAGCANNT

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CKGTTAGTAG-----
NNNTTAGGTAGCNTNT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CKGTTAGTAG
GGCVGTTR----

MA0122.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CKGTTAGTAG-
--TTAAGTGGA

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CKGTTAGTAG
TGGCAGTTGG---

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CKGTTAGTAG
BCMATTAG---

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CKGTTAGTAG
NNNTGGCAGTTGGTNN