Information for motif25


Reverse Opposite:

p-value:1e-45
log p-value:-1.058e+02
Information Content per bp:1.955
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.4 +/- 59.9bp
Average Position of motif in Background96.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)2.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CAGAAAATCACT-
---CAAATCACTG

MA0483.1_Gfi1b/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAGAAAATCACT---
----AAATCACAGCA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAGAAAATCACT--
----AAATCACTGC

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAAATCACT
NACAGGAAAT----

MA0485.1_Hoxc9/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGAAAATCACT
GGCCATAAATCAC-

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGAAAATCACT
NACAGGAAAT----

MA0156.1_FEV/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGAAAATCACT
CAGGAAAT----

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGAAAATCACT---
AAGGCGAAATCATCGCA

MA0027.1_En1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGAAAATCACT-
--GANCACTACTT

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGAAAATCACT
-----AATTATT