Information for motif26


Reverse Opposite:

p-value:1e-30
log p-value:-7.031e+01
Information Content per bp:1.530
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.8 +/- 29.6bp
Average Position of motif in Background89.3 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:ACTACGTGTGAA
-CTAGGTGTGAA

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ACTACGTGTGAA-
---AGGTGTGAAM

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACTACGTGTGAA----
GAAAAGGTGTGAAAATT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACTACGTGTGAA-
---AGGTGTTAAT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ACTACGTGTGAA--
----CSTGGGAAAD

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACTACGTGTGAA
GGGTACGTGC---

MA0104.3_Mycn/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTACGTGTGAA
GCCACGTG----

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTACGTGTGAA
--TACGTGCV--

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTACGTGTGAA----
GGGCCGTGTGCAAAAA

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTACGTGTGAA
-GGACGTGC---