Information for motif8


Reverse Opposite:

p-value:1e-188
log p-value:-4.335e+02
Information Content per bp:1.663
Number of Target Sequences with motif3066.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif1724.8
Percentage of Background Sequences with motif3.38%
Average Position of motif in Targets102.5 +/- 53.8bp
Average Position of motif in Background100.0 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAAAGG----
NANAGATCAAAGGGNNN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAAAGG----
NNNAGATCAAAGGANNN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AGATCAAAGG--
ACATCAAAGGNA

MA0523.1_TCF7L2/Jaspar

Match Rank:4
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--AGATCAAAGG--
AAAGATCAAAGGAA

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---AGATCAAAGG----
TATAGATCAAAGGAAAA

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---AGATCAAAGG----
TATAGATCAAAGGAAAA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AGATCAAAGG
ACATCAAAGG

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AGATCAAAGG
ACWTCAAAGG

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---AGATCAAAGG----
ATAAGAACAAAGGACTA

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---AGATCAAAGG----
AGAAGAACAAAGGACTA