Information for motif13


Reverse Opposite:

p-value:1e-35
log p-value:-8.222e+01
Information Content per bp:1.845
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.8 +/- 53.9bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCCTAGTGA
ATTTGCATAT---

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCTAGTGA
ATTTGCATAA---

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCCTAGTGA
TNTAATTTGCATANNN-

MA0507.1_POU2F2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTTGCCTAGTGA
TTCATTTGCATAT---

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCCTAGTGA
TNTAATTTGCATACNA-

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTTGCCTAGTGA-
AAAATATGCATAATAAA

MA0150.2_Nfe2l2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTTGCCTAGTGA-----
--TGCTGAGTCATNNTG

MA0501.1_NFE2::MAF/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCCTAGTGA-
AAANTGCTGAGTCAT

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCCTAGTGA
NNACTTGCCTT----

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTTGCCTAGTGA--
--TCCCNNGGGACN