Information for motif14


Reverse Opposite:

p-value:1e-34
log p-value:-8.013e+01
Information Content per bp:1.852
Number of Target Sequences with motif164.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif92.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets104.7 +/- 56.7bp
Average Position of motif in Background99.5 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0507.1_POU2F2/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-TGATTTGCAT--
TTCATTTGCATAT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.87
Offset:2
Orientation:forward strand
Alignment:TGATTTGCAT--
--ATTTGCATAA

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TGATTTGCAT----
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TGATTTGCAT----
TNTAATTTGCATACNA

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:TGATTTGCAT--
--ATTTGCATAT

OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TGATTTGCAT-------
--ATTTGCATAACAATG

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGATTTGCAT-------
--ATTTGCATAACAAAG

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGATTTGCAT
CNGTGATTTN---

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGATTTGCAT------
AAAATATGCATAATAAA

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGATTTGCAT---
---ATTGCATCAK