Information for motif15


Reverse Opposite:

p-value:1e-33
log p-value:-7.716e+01
Information Content per bp:1.747
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.2 +/- 50.4bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0467.1_Crx/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGAGHTTAGCC
AAGAGGATTAG--

MA0136.1_ELF5/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGHTTAGCC
AAGGAAGTA----

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGGAGHTTAGCC
AACAAGGAAGTAA---

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGHTTAGCC
NTNNNAGGAGTCTCNTN

PH0015.1_Crx/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGAGHTTAGCC-
CGTTGGGGATTAGCCT

MA0156.1_FEV/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGAGHTTAGCC
CAGGAAAT-----

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGHTTAGCC
NACAGGAAAT-----

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGAGHTTAGCC---
AGGGGGATTAGCTGCC

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGAGHTTAGCC--
TTAAGGGGATTAACTAC

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGAGHTTAGCC
---GGATTAGC-