Information for motif18


Reverse Opposite:

p-value:1e-23
log p-value:-5.503e+01
Information Content per bp:1.895
Number of Target Sequences with motif519.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif571.5
Percentage of Background Sequences with motif1.80%
Average Position of motif in Targets98.5 +/- 53.5bp
Average Position of motif in Background100.0 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---AATGGGAT------
TATTATGGGATGGATAA

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------AATGGGAT--
NNTNNACAATGGGANNN

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AATGGGAT------
CTACTAGGATGTNNTN

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATGGGAT-----
AAAAACGGATTATTG

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATGGGAT-------
TTAAGGGGATTAACTAC

MA0467.1_Crx/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AATGGGAT---
AAGAGGATTAG

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATGGGAT-------
TTAGAGGGATTAACAAT

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATGGGAT-------
TGAACCGGATTAATGAA

Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AATGGGAT--
GTAATCDGATTA

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATGGGAT--
YTAATYNRATTA