Information for motif19


Reverse Opposite:

p-value:1e-22
log p-value:-5.231e+01
Information Content per bp:1.939
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets95.2 +/- 57.4bp
Average Position of motif in Background109.2 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGTTAGCGG
TGGCAGTTGG---

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTAGCGG
BRRCVGTTDN---

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTAGCGG
BCMATTAG---

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTTAGCGG
CACGGCAGTTGGTNN

MA0100.2_Myb/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTAGCGG
TGGCAGTTGN---

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAGTTAGCGG--
NNTGTAGGTAGCANNT

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CAGTTAGCGG
NNNTGGCAGTTGGTNN

PH0032.1_Evx2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTTAGCGG--
ANCGCTAATTAGCGGTN

PH0098.1_Lhx8/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGTTAGCGG--
ACCCCTAATTAGCGGTG

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGTTAGCGG
GGCVGTTR----