Information for motif22


Reverse Opposite:

p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.965
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.9 +/- 55.9bp
Average Position of motif in Background102.9 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGTTAA
ANGNAAAGGTCA-

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAGAGGTTAA----
GGCGAGGGGTCAAGGGC

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGAGGTTAA---
TCTCAAAGGTCACGAG

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGTTAA
CTTGAGTGGCT--

MA0029.1_Mecom/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGAGGTTAA--
AAGATAAGATAACA

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGGTTAA------
NNNTTAGTTAACTNANN

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGGTTAA-----
NANAGGGATTAATTATN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGAGGTTAA----
CTCCAGGGGTCAATTGA

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGAGGTTAA---
TCTCAAAGGTCACCTG

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGAGGTTAA----
TTAGAGGGATTAACAAT