Information for motif23


Reverse Opposite:

p-value:1e-10
log p-value:-2.390e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets79.4 +/- 58.1bp
Average Position of motif in Background127.0 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCTATTGTAGCC
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCTATTGTAGCC
TNNTGCTACTGTNNNN

MA0077.1_SOX9/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTATTGTAGCC
-CCATTGTTC--

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTATTGTAGCC
-CCATTGTTNY-

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTATTGTAGCC---
CNNNTATTGTTCNNNNN

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTATTGTAGCC
-CCWTTGTY---

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTATTGTAGCC-
NNNCCATTGTGTNAN

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTATTGTAGCC---
AATCAATTGTTCCGCTA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTATTGTAGCC
GGGATTGCATNN

MA0078.1_Sox17/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTATTGTAGCC
CTCATTGTC---