Information for motif25


Reverse Opposite:

p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.957
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets106.1 +/- 51.7bp
Average Position of motif in Background93.8 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTCTATCTG--
--GCCATCTGTT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTCTATCTG
-YSTTATCT-

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGTCTATCTG
-TCTTATCT-

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTCTATCTG
NCCTTATCTG

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTATCTG-----
CCNNACCATCTGGCCTN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTCTATCTG
NNCTTATCTN

MA0461.1_Atoh1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTCTATCTG
--GCCATCTG

MA0035.3_Gata1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTCTATCTG-
TTCTTATCTGT

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGTCTATCTG--
-TCTTATCTCCC

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTCTATCTG-
-VBSYGTCTGG