Information for motif9


Reverse Opposite:

p-value:1e-76
log p-value:-1.770e+02
Information Content per bp:1.841
Number of Target Sequences with motif1271.0
Percentage of Target Sequences with motif7.10%
Number of Background Sequences with motif1293.6
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets99.2 +/- 54.3bp
Average Position of motif in Background97.6 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGGGGC
GGGGGCGGGGC

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GGGGAGGGGC
GGGGNGGGGC

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--GGGGAGGGGC--
AGGGGGCGGGGCTG

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGGGGC-
GGGGGCGGGGCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GGGGAGGGGC
-GGGGGGGG-

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAGGGGC
GGGNGGGGGCGGGGC

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGGAGGGGC
TGGGTGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGGGAGGGGC
DGGGYGKGGC

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAGGGGC-
NNTNAGGGGCGGNNNN

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GGGGAGGGGC---
NNAGGGGCGGGGTNNA