Information for motif10


Reverse Opposite:

p-value:1e-26
log p-value:-6.025e+01
Information Content per bp:1.858
Number of Target Sequences with motif877.0
Percentage of Target Sequences with motif6.32%
Number of Background Sequences with motif1558.0
Percentage of Background Sequences with motif4.35%
Average Position of motif in Targets101.0 +/- 55.4bp
Average Position of motif in Background99.2 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CGTGTGAC-
AGGTGTGAAM

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----CGTGTGAC----
GAAAAGGTGTGAAAATT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CGTGTGAC
AGGTGTCA-

MA0009.1_T/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CGTGTGAC
CTAGGTGTGAA

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGTGAC----
TNNNNGGTGTCATNTNT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTGAC-
AGGTGTTAAT

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTGAC
ATGGGGTGAT

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTGAC--
GTGGCGTGACNG

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGTGTGAC--
CSTGGGAAAD

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGTGTGAC---
CGCGCCGGGTCACGTA