Information for motif11


Reverse Opposite:

p-value:1e-25
log p-value:-5.808e+01
Information Content per bp:1.697
Number of Target Sequences with motif284.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif368.2
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets101.3 +/- 54.3bp
Average Position of motif in Background99.6 +/- 55.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0523.1_TCF7L2/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AAACATCAAAGG--
AAAGATCAAAGGAA

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.89
Offset:2
Orientation:forward strand
Alignment:AAACATCAAAGG
--ACWTCAAAGG

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.88
Offset:2
Orientation:forward strand
Alignment:AAACATCAAAGG--
--ACATCAAAGGNA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.86
Offset:2
Orientation:forward strand
Alignment:AAACATCAAAGG
--ACATCAAAGG

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-AAACATCAAAGG----
NNNAGATCAAAGGANNN

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-AAACATCAAAGG----
NANAGATCAAAGGGNNN

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AAACATCAAAGG----
TATAGATCAAAGGAAAA

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AAACATCAAAGG----
TATAGATCAAAGGAAAA

MA0115.1_NR1H2::RXRA/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAACATCAAAGG-----
AAAGGTCAAAGGTCAAC

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACATCAAAGG-
AAAAATAACAAACGG