Information for motif13


Reverse Opposite:

p-value:1e-22
log p-value:-5.231e+01
Information Content per bp:1.578
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.8 +/- 59.5bp
Average Position of motif in Background81.9 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAACACGAT
SCTGTCARCACC--

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAACACGAT
TATGTAAACANG--

MA0480.1_Foxo1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTCAACACGAT
TGTAAACAGGA-

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TGTCAACACGAT
AATTACCTGTCAATAC---

MA0047.2_Foxa2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGTCAACACGAT
NCTAAGTAAACA----

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGTCAACACGAT
-GTAAACAG---

MA0157.1_FOXO3/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTCAACACGAT
TGTAAACA----

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGTCAACACGAT
--ACAACAC---

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAACACGAT
NDGTAAACARRN-

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------TGTCAACACGAT
AACTAGCTGTCAATAC---