Information for motif17


Reverse Opposite:

p-value:1e-16
log p-value:-3.772e+01
Information Content per bp:1.530
Number of Target Sequences with motif1077.0
Percentage of Target Sequences with motif7.76%
Number of Background Sequences with motif2152.5
Percentage of Background Sequences with motif6.01%
Average Position of motif in Targets103.8 +/- 56.0bp
Average Position of motif in Background99.8 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--VSAGATTCCY-----
TACGAGACTCCTCTAAC

MA0038.1_Gfi1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-VSAGATTCCY
CNGTGATTTN-

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:VSAGATTCCY--
GGGGATTCCCCC

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:VSAGATTCCY
--GGATTAGC

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--VSAGATTCCY
CAGCTGTTTCCT

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:VSAGATTCCY--
-----TTCCTCT

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----VSAGATTCCY
TTGCCCGGATTAGG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--VSAGATTCCY
GCAGTGATTT--

MA0164.1_Nr2e3/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:VSAGATTCCY
CAAGCTT---

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:VSAGATTCCY--
--RCATTCCWGG