Information for motif18


Reverse Opposite:

p-value:1e-15
log p-value:-3.549e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.9 +/- 41.9bp
Average Position of motif in Background57.0 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAGTAGGAGCTA---
CTACTAGGATGTNNTN

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAGTAGGAGCTA
----CGGAGC--

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TAGTAGGAGCTA
ADGGYAGYAGCATCT-

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TAGTAGGAGCTA
NNTGTAGGTAGCANNT-

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TAGTAGGAGCTA
NNNTTAGGTAGCNTNT-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TAGTAGGAGCTA
------CAGCC-

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TAGTAGGAGCTA--
----AGGTGTTAAT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TAGTAGGAGCTA
-ANCAGGATGT-

MA0136.1_ELF5/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TAGTAGGAGCTA
---AAGGAAGTA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TAGTAGGAGCTA
----AGGTGTCA