Information for motif22


Reverse Opposite:

p-value:1e-12
log p-value:-2.862e+01
Information Content per bp:1.975
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets118.6 +/- 63.6bp
Average Position of motif in Background84.2 +/- 47.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TTATGCAAAT
TTATGCAAAT

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--TTATGCAAAT----
TTGTATGCAAATTAGA

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--TTATGCAAAT----
TTGTATGCAAATTAGA

MA0507.1_POU2F2/Jaspar

Match Rank:4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TTATGCAAAT---
ATATGCAAATNNN

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TTATGCAAAT
ATATGCAAAT

OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGCAAAT
CATTGTTATGCAAAT

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TTATGCAAAT---
TNNATTATGCATANNTT

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:8
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----TTATGCAAAT
CTTTGTTATGCAAAT

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TTATGCAAAT-
ANATTTTTGCAANTN

MA0102.3_CEBPA/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTATGCAAAT
NATTGTGCAAT-