Information for motif26


Reverse Opposite:

p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.804
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif96.3
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets98.5 +/- 51.8bp
Average Position of motif in Background92.6 +/- 54.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACCGVTTA
TGTCGGTT-

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACCGVTTA-
BRRCVGTTDN

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ACCGVTTA----
AAAACATCGTTTTTAAG

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACCGVTTA---
AAAAACCATTAAGG

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ACCGVTTA----
NNANTAACGGTTNNNAN

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACCGVTTA--
TTGCCCGGATTAGG

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ACCGVTTA----
NNNNTAACGGTTNNNAN

MA0063.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCGVTTA-
--CAATTAA

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACCGVTTA-
-BCMATTAG

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACCGVTTA----
AAAAACCAATTAAGAA