Information for motif29


Reverse Opposite:

p-value:1e-6
log p-value:-1.446e+01
Information Content per bp:1.844
Number of Target Sequences with motif200.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif358.1
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets100.6 +/- 55.9bp
Average Position of motif in Background101.9 +/- 63.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTTTT--
NNNNTTTTTTTTTNAAC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTTTTT--
TTTTTTTTCNNGTN

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTTTTT---
NTNTTGTTGTTTGTN

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTTTT--
GNATTTTTTTTTTGANC

MA0481.1_FOXP1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTTTTTTT--
CTTTGTTTACTTTTN

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTTTTTTTTTT----
-NNTTTNTTTTNGNNN

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTTTTTTT-
NNTTTTTCTTATNT

MA0041.1_Foxd3/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTTTTTTTTTT
GAATGTTTGTTT-

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTTTT--
NNNTTTGTTTACNTTNN

MA0042.1_FOXI1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTTTTTTTTTT
GGATGTTTGTTT-