Information for motif3


Reverse Opposite:

p-value:1e-149
log p-value:-3.453e+02
Information Content per bp:1.537
Number of Target Sequences with motif1639.0
Percentage of Target Sequences with motif11.81%
Number of Background Sequences with motif2119.8
Percentage of Background Sequences with motif5.92%
Average Position of motif in Targets99.0 +/- 52.7bp
Average Position of motif in Background98.7 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:NNRCATTCCH--
--GCATTCCAGN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NNRCATTCCH--
--RCATTCCWGG

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.90
Offset:1
Orientation:forward strand
Alignment:NNRCATTCCH---
-CACATTCCTCCG

MA0081.1_SPIB/Jaspar

Match Rank:4
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:NNRCATTCCH--
-----TTCCTCT

MA0101.1_REL/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-NNRCATTCCH
GGGGATTTCC-

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:NNRCATTCCH
GGAAATTCCC

MA0105.3_NFKB1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-NNRCATTCCH
GGGAAATTCCC

MA0598.1_EHF/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:NNRCATTCCH-
---CCTTCCTG

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--NNRCATTCCH-----
GACCACATTCATACAAT

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:NNRCATTCCH------
--ACATTCATGACACG