Information for motif6


Reverse Opposite:

p-value:1e-63
log p-value:-1.463e+02
Information Content per bp:1.763
Number of Target Sequences with motif2273.0
Percentage of Target Sequences with motif16.37%
Number of Background Sequences with motif4136.3
Percentage of Background Sequences with motif11.54%
Average Position of motif in Targets102.1 +/- 55.5bp
Average Position of motif in Background98.7 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:VYCCCTCCCC-
GCCCCGCCCCC

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:VYCCCTCCCC
GCCCCGCCCC

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--VYCCCTCCCC--
NAGCCCCGCCCCCN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-VYCCCTCCCC-----
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--VYCCCTCCCC-----
TCACCCCGCCCCAAATT

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.80
Offset:0
Orientation:forward strand
Alignment:VYCCCTCCCC-----
GCCCCGCCCCCTCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:VYCCCTCCCC
-CCCCCCCC-

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:VYCCCTCCCC
GCCCCACCCA

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.78
Offset:0
Orientation:forward strand
Alignment:VYCCCTCCCC----
CCCCCGCCCCCGCC

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---VYCCCTCCCC----
ANNTNCCCACCCANNAC