Information for motif1


Reverse Opposite:

p-value:1e-2361
log p-value:-5.437e+03
Information Content per bp:1.850
Number of Target Sequences with motif6975.0
Percentage of Target Sequences with motif13.55%
Number of Background Sequences with motif800.2
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets100.7 +/- 53.3bp
Average Position of motif in Background90.6 +/- 200.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGGGCC
GGGGGCGGGGCC

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGGGGCC
GGGGNGGGGC-

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGGGCC-
AGGGGGCGGGGCTG

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGGGCC
TGGGTGGGGC-

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGGGCC--
NNAGGGGCGGGGTNNA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGGGCC
DGGGYGKGGC-

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGGGCC
GGGGGCGGGGC-

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.85
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGGGCC
GGGNGGGGGCGGGGC-

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGCGGGGCC
GGGCGGGACC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGGCGGGGCC
GGGGGGGG--