Information for motif11


Reverse Opposite:

p-value:1e-622
log p-value:-1.432e+03
Information Content per bp:1.903
Number of Target Sequences with motif429.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.3 +/- 52.0bp
Average Position of motif in Background100.3 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:GGGAATTGTAGT
GGGAATTGTAGT

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.84
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAATTGTAGT-
GCATTCTGGGAATTGTAGTT

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGAATTGTAGT----
GNNATTTGTCGTAANN

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGAATTGTAGT---
GGGGTTTGTGGTTTG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGGAATTGTAGT---
---NNHTGTGGTTWN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTGTAGT
TGGGGA--------

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGGAATTGTAGT---
-----CTGTGGTTTN

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTGTAGT
AGAGGAAGTG----

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGAATTGTAGT--
----GCTGTGGTTT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGAATTGTAGT------
-NNNANTGCAGTGCNNTT