Information for motif19


Reverse Opposite:

p-value:1e-215
log p-value:-4.958e+02
Information Content per bp:1.530
Number of Target Sequences with motif590.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif60.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets103.6 +/- 56.1bp
Average Position of motif in Background92.2 +/- 122.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---GCGCAGTG---
GCCGCGCAGTGCGT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GCGCAGTG-----
NNNANTGCAGTGCNNTT

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCAGTG----
NNNNTGAGCACTGTNNG

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCGCAGTG
GCGCATGCGCAG--

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGCAGTG--
-TTAAGTGGA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCGCAGTG----
--GCAGTGATTT

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGCAGTG
-CACAGN-

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCAGTG--
NNNNTTGGCGCCGANNN

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGTG
GGCGCGCT-

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCAGTG--
NNNNTTGGCGCCGANNN