Information for motif2


Reverse Opposite:

p-value:1e-1573
log p-value:-3.623e+03
Information Content per bp:1.665
Number of Target Sequences with motif12372.0
Percentage of Target Sequences with motif24.03%
Number of Background Sequences with motif2900.1
Percentage of Background Sequences with motif10.80%
Average Position of motif in Targets99.2 +/- 53.4bp
Average Position of motif in Background96.8 +/- 98.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--GYAAACAA--
NDGTAAACARRN

MA0031.1_FOXD1/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GYAAACAA
GTAAACAT

MA0593.1_FOXP2/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--GYAAACAA-
AAGTAAACAAA

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GYAAACAA
GTAAACAG

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GYAAACAA
TGTAAACA-

MA0480.1_Foxo1/Jaspar

Match Rank:6
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GYAAACAA--
TGTAAACAGGA

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---GYAAACAA
AAAGTAAACA-

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---GYAAACAA-
TATGTAAACANG

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--GYAAACAA
AAATAAACA-

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----GYAAACAA-
CAAACGTAAACAAT